rs33642940 SNP Detail

Summary

• ID
  rs33642940
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:164717326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAACA TTTTTTGGTG AGGATCTTTT
  R
  CCTGCAAGTA TGTATGTACG TGCAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45303148	mCV23132257	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss148232659	ENSMUSSNP5805039	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss320607026	CHEV_2_164700906	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33642940					SNP	A	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164717326 () rs orientation: forward

Symbol	Name	Function Class
Gm75526	predicted gene, 75526	931 bp upstream
Rr569745	regulatory region 569745	942 bp distal
Rr569746	regulatory region 569746	441 bp distal
Rr569747	regulatory region 569747	432 bp proximal