rs33633369 SNP Detail

Summary

• ID
  rs33633369
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21531270 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCTGTACT GGGGCATATA
  AAGTTTGCAA GTCCAATGGG CCTCTCTTTC CAGTGATGGC CGACTAGGCC ATCTTTTGAT
  ACATATGCAG CTAGAGACAA GAGCTCCGGG GTACTGGTTA GTTCATAATG TTGTTCCACC
  GATAGGGTTG CAGATCCCTT TAGCTCCTTT AAACATACAC AGTGTTTCGT GGACAATCTC
  Y
  GTCATCCTGG TCATCTTTTG TCGTTCTGTC TTTTCCATTT AAACCACCCC ACTGACCTTC
  AGACCTCATC CAGACCTCAT GGGTGTCCCA AAGAAGACAA CACACGGATC CTTTAAGAGC
  CAGACATTTT CTATACGTCC ACCTCCCCTT GGTGGGGGTA ACTGAATAAA GGCTGCTATC
  TTCTCTGGGT CCCGCTTCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46837685	NES10851194	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33633369					SNP	T	T	T	T	T	T	C	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46837685	NES10851194	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21531270 () rs orientation: forward

Symbol	Name	Function Class
Gm31610	predicted gene, 31610	within coordinates
Rr574124	regulatory region 574124	301 bp proximal
Rr574125	regulatory region 574125	1749 bp proximal