rs33624121 SNP Detail

Summary

• ID
  rs33624121
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:50516542 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATCCTACT GTTCCATCCA
  GGATCTCTCC CCACACGATG ATGTCATCCA TATTCAGGGT GGGTCTCCCT TGAATTCCCT
  CACAGACATA CCAGTTTCCT GGGCGATTCT AAATCCAGGA AAGTTGACAA AGATTGACTC
  TCATAGGAAC TCAAGCAGAA GACAGGAGAA CAGACCTAGT GGGTGGGTCT TGCCTGTGAT
  Y
  CCAGAATTTG GGGGCTGAGG AGGATGCTGT AAGTCTGACG GCTACATAGT GAGTTTGAAG
  CCAGCCTGAA CTACAGAGTA AGACCTTGTC AAGGAGAGGA GGAGAATGGG GGAAGGGAAA
  GAAAAGAGAA AGGAAAAGAC ACTCTGGGTT TGGGGTAGAG AATCCACTCA AGCGAATATA
  AGCAAAAACT AAAATGCAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39558690	mCV23756374	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33624121					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:50516542 () rs orientation: forward

Symbol	Name	Function Class
D17Mit216	DNA segment, Chr 17, Massachusetts Institute of Technology 216	1860 bp proximal
Gm37173	predicted gene, 37173	578 bp upstream
Gm64618	predicted gene, 64618	within coordinates