rs33621038 SNP Detail

Summary

• ID
  rs33621038
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:105299211 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCCAGAAT TCTGTAGATA
  GATGGTGAAA GTGGAGGCCA TGACAATAGA AGGCCACTAG AGAAGTCAGG GGAGTGAAGG
  GGATGCACCT GATCTCACCC CACACTGCCA CAAGGAGATC AAAACCAAGT TCTACACTGC
  CCCTCCCCAA CCCATGTGCC TGTGAAAGAG AGATAGGTGG ATTAGCCTTG AGCTTGCATC
  S
  AGCCACTCAC TTAAATCTCA GTGAAGGAGG GCAAGATTTC CCCTTGAGGC CTTTTTAAAA
  AACCAGTAGC TCCTTGTATA TGCTCAGGTA CATATGGATA GACGACTAGA CACCTAATTA
  GATCTAAGTT AGAACTTCTC AATGTGGCTT TGCATTTAAC TTTTTAATTT TATTTAAGTG
  TATTGTGTGC CTGCATGTAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46835970	NES10710976	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33621038					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46835970	NES10710976	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105299211 () rs orientation: forward

Symbol	Name	Function Class
Rr582698	regulatory region 582698	834 bp proximal