rs33606296 SNP Detail

Summary

• ID
  rs33606296
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:50518766 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCCC CTCCCAGAAA CTCCCTATCC
  Y
  ATACCCCCTT CCCCTGCTTC TATGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39556743	mCV23756393	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss145744640	ENSMUSSNP5155425	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33606296					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:50518766 () rs orientation: forward

Symbol	Name	Function Class
D17Mit216	DNA segment, Chr 17, Massachusetts Institute of Technology 216	250 bp distal
Gm9191	predicted gene 9191	1013 bp downstream
Gm37173	predicted gene, 37173	within coordinates
Gm64618	predicted gene, 64618	1740 bp upstream