rs33600207 SNP Detail

Summary

• ID
  rs33600207
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:164661467 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TAAGCAAGCA GTGACTAGCT GAGCCCTCCA CTGCTGGTGT CAGCTTCCCC TTACATCCTG
  CATCAGAGCG GGTTGTTGGC AGCAAAAAAT GGCAACAGAC AGAATGACAG TAATTGGGCC
  TTTAGGCCAG GTATAGTACA TAGCTCACTT TTGTAACCGC AGTTCATGGG AGGTAGAGCC
  AGCAAGGCTG TGGCAAGTTC AAGGCCAGCT GGGACTACAT CATGAGCTCC CTTCCACTCC
  CCAAACTAAA AAAAAAAAAA AAAGAACCAA CACAAATACA AACAAATAGA TAAGCTTGTA
  R
  AAGAAACTAA GGGGTGTTGT AATAGGGACA GTCTTGAAGG GGGAGCCGAA AGTGCTGTGA
  CTACAGAGTC ACTGCACATT CTTCTCCTCA CACTCTAGAC GGCTTTGTGG TCTCTAAGAA
  ATGTATTGGT CAATATAAAT GGCTACCAGG TCTTATCTTA CAAGAGGGGC AACCAGCACC
  TTTCTCATTG TCACCTCTAC CTTCCCTAGA TATGTGCAGG TGAAATTTGT CTGTATTCGG
  ACGCAGTCAA ACAGGAAGAA AACTCGGAAG GTGGACAGGT GTCCAGCGTA TCTGCTGCTG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45298689	mCV23739686	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33600207					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164661467 () rs orientation: forward

Symbol	Name	Function Class
Gm75078	predicted gene, 75078	293 bp downstream
Rr569720	regulatory region 569720	1813 bp distal
Rr569721	regulatory region 569721	1448 bp distal
Rr569722	regulatory region 569722	1727 bp distal
Tssr27543	transcription start site region 27543	1548 bp downstream
Zswim3	zinc finger SWIM-type containing 3	Intron