rs33599721 SNP Detail

Summary

• ID
  rs33599721
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:181210940 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGCAGAGAA TGCCTTGTCC TGCTGGACCT TTTACCTCAC
  CCTCAGATAC CTTGGGGAGA CTGCCTCAAC AGAGTCCACC CAGGTTACAT TCTGCCACAC
  R
  ATCATTTTCT AAATAAAGCT TTATTTATTT TATAAAATGT GTAAACTGAT TATTTTTATT
  TCGGTAACAT TTTTAAACTC AAAATAAGTT AATGTGTTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45298592	mCV23780430	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	A
ss148402236	ENSMUSSNP6979345	ENSEMBL	ENSEMBL_Sanger	f	SNP			A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33599721					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:181210940 () rs orientation: forward

Symbol	Name	Function Class
Rr573031	regulatory region 573031	62 bp distal
Rr573032	regulatory region 573032	710 bp distal
Uckl1	uridine-cytidine kinase 1-like 1	2 bp downstream