rs33591565 SNP Detail

Summary

• ID
  rs33591565
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:133594016 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTCATAG TGTGAAGAAA
  AACTTTTAAT TTGCTTCTCA TCCCATTTAT TATTTCATAA ACTAATGGAG TCATATTCAG
  AAAGTAATTA CCTATTATTA CAGTTTGAAA CATTTCCTTC ATGTGTTCCT GTAGTAGCTT
  TAAAGTGTCA AGTTTTCCAT TAAGATCTCC TCCCACCCCT CTTTTATGCA CTATGAGCGA
  W
  AAGGCTACAG TTTCAGTATT GTTCATGCAG CTTTTCCATT TTCCAGAACC ACTTGTCCAA
  GCAATTATTT ATTGCCCAGT ATATGTTCTT GCCATTTTCT TAAGAATAAG ATAACTGTCT
  TCATGAACTT TTTTTTCAGA ATCTTCTGTC AACTGATTAG TCCTTTTCCA TATAAGGCAA
  ATGCCCACCT GTGGGTAATC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45297800	mCV27569967	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
ss320511738	CHEV_2_133577832	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33591565					SNP	A	T	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:133594016 () rs orientation: forward

Symbol	Name	Function Class
Gm39940	predicted gene, 39940	within coordinates
Rr565637	regulatory region 565637	1486 bp distal