rs33587266 SNP Detail

Summary

• ID
  rs33587266
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17943822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCACCTCT CAGAGCTTTG
  TGCATGATTC AAACCTAGCA GAGCATCTGG CTTTGGTTAA GCAAAAGAAG AAAAATAAAC
  AAACACAAGT CCTCCATCTA AAGTGAAAAG TACCTGCATG TAACATCTCA ATCCAGTGTG
  TCTTTTGCAC ACTTTCCCCT TTGATTTAGA ATCCTACTCT TCCTCAGGCA CATCAAGGCA
  K
  GTAGTGTTCT GGGACGCAGC GGCCAGTCTC CTCTCAGGGC TTGGGATCCT GGTCTCTGCC
  CCGGAGCAGT GAGATGGGTT GGTAATTTGC AGGGCTAACT TTTCTTTGTA TGTGTTTTAT
  GCAAACCCGT GATGAGATTG TACAGCTGGC TTCTGTTCTT ACAGAACGTA TCTGGTGCGA
  GGTTGACCCC ATATACATAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47816592	NES11703468	PERLEGEN	MM_PANEL2	f	SNP	T	G	G	G	G	G	G	G	G	G	T	T	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33587266					SNP	T	G	G	G	G	G	G	G	G	G	T	T	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47816592	NES11703468	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17943822 () rs orientation: forward

Symbol	Name	Function Class
Rr626887	regulatory region 626887	within coordinates
St7	suppression of tumorigenicity 7	800 bp downstream