rs33585392 SNP Detail

Summary

• ID
  rs33585392
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:13080346 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTACTTTTTA ATGTTTTTGA TTTTTGTTTC TCCCCTACAT
  CTCTTGTCTA GGAAAATAAT GACGCATAGG TTTCTTTTCA TGTCTCCTCT CATCTATGAC
  Y
  TTGTCCTGGA GCTGAGAGAA GCCAAATTAC TCCTTTAATC CCTCCCTTGA GGAATTTAAA
  CCCCTTTCTG GTTAAAATGT GCTCCCAGCT TTTTTTCTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss47816575	NES11975743	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	T	C	C	T	T	C	T	T	C
ss146812727	ENSMUSSNP473290	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T						C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs33585392					SNP	T	T	T	T	T	T	T	C	C	T	T	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47816575	NES11975743	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:13080346 () rs orientation: forward

Symbol	Name	Function Class
Gm47402	predicted gene, 47402	624 bp upstream