rs33584849 SNP Detail

Summary

• ID
  rs33584849
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104492831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATGTGCCC CCCCCCCCAA
  AGAACCACAA AAGAATGCAT CATAATTTAA AATAAAATAA ACAAAAAAGA GAGAGAGAGA
  GCTGGGCCGG TAGTGTGCGC TCTCCAGATG ACTCAGGGTA CTGTGCACAG CCCAGCACCG
  GGAAGCCACT TTCCCAGTGA TAACACTGAA GGCCGTCAAC CAAGTGATAA AACTCTTGCT
  Y
  CATTCATCAG AGTTCTCCAG AAGAACAGGG CCGATAGGAT GTGAACAGTG ACTTGTTAAA
  TGGACTCCAT GATTGGCTGG GGAGTATAAC AATGGCTATC TGTGTGCTGG GGAGCCAGAG
  AGCCACGGTG CTTCTCAGTC CAAAATGCCA GAGGCCTCAG AATAAGGGAG ACAGATAGAT
  GACAGCCCTA GTGTGAGGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46831479	NES10728934	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33584849					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46831479	NES10728934	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104492831 () rs orientation: forward

Symbol	Name	Function Class
Gm64517	predicted gene, 64517	125 bp upstream
Rr582544	regulatory region 582544	within coordinates
Rr582545	regulatory region 582545	136 bp proximal