rs33584714 SNP Detail

Summary

• ID
  rs33584714
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:93008221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCTTGGGAGG GGCTGCCAGT TTGAGGTGTC TGGGGTGGGG GTGGGGGTGG GGGTCTTGAC
  TGCAGGGTCA GAGGTCAGGA AGGCTCTTCA GAGAAAATAA TATCCACCCT GGCATAAAAA
  GAACGTGAAC AAGAAATGCT AATTAAAGGT GGAGATGAGC TGGGCAGAGG ACAGCAAGCA
  TGGAGACAGA GGGAGACACA GAGGGGTCCT GGCAATGACA TCTGCTCTGC TCTCTCCTCC
  ACCGCAGTAG AAGAGGCTGT GATGGGTTCC ACACACTGTG TGTGTGTGTG TGTGTGTGCG
  Y
  GCGCGCGCGG CGTGCGTGCG TGCGTGCGTG CGTGAGTGCA CTGTGTGTGC ACTTTGTGTG
  TGTGTGTACT GTGTGTGCAC TGTGTGTGCG CTTTGTGTGT GTGTGTACTG TGTGTGCACT
  TTGTGTGTGT GCACTTTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGGT
  GCATTCATTC CTTCATTTGT TTTACATGGC ACCCTTTAAA CTCTACCACA AATCTTACAA
  AGCAAACCGG CAGATCCGTG ATGGCCCAGA CCCTGAGGCC ACGATGTACT GCTGTACAGG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45296312	mCV25081182	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33584714					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:93008221 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11941	CpG island 11941	within coordinates
Gm32683	predicted gene, 32683	1849 bp upstream
Rr561105	regulatory region 561105	within coordinates
Rr561106	regulatory region 561106	1569 bp proximal
Rr561107	regulatory region 561107	1719 bp proximal