rs33583532 SNP Detail

Summary

• ID
  rs33583532
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104467806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTGTCTCA AACAACAGCA
  AAAAGAAACA CCACCACCAC CACCACCACC CCCCAAAAAA AAGAGAAAAG GGAAGAAAGT
  AGCAATGGAA AGGACACTGT CCTACTTAGC TGGCACTTTT ATTGTGCTAG AGCCTTCTCC
  TCTTCTCCTA TGCTCCTCGG CTCTGGAGAA GTAAGGTTCC GGAGGAAAGG ACCCAGGCCT
  Y
  ACTTCCTCAA AGCAAAACAA ACCAGGACAA CCAGGCAGAG CATGAAGCTT GAACTACACC
  CCTGAAATAT CAGGCCTCCA AAACAGATCT TGGAAGGAGG ACCCTAAAGT GAACAAAAAT
  TGTGTCAAAG CCACGTTGTA CGTTCTTGGT GGTCATGTTG AAAACAATTT CTCTCCAGTC
  ACAGACAGAT CAGGATGGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46831194	NES10730401	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33583532					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46831194	NES10730401	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104467806 () rs orientation: forward

Symbol	Name	Function Class
Rr582541	regulatory region 582541	1112 bp proximal