rs33581741 SNP Detail

Summary

• ID
  rs33581741
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:152790308 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATGCTCGG CTCTTTTCAC
  ATGGGTGCTG GGGATCTATA GAAAGTGCTC TTGACTCAGA GAAAGTCAGT GATGCCAGTA
  CTATTGTAAG ATTCCCACTT AATAGGTGAC TGGGGGCTCA GCTTGTCTTG TGCATAAGGT
  CACAAGGAGA ATAAATGGTC TCCTGATTCT AGCACCAGTG GCCTGAGTTT TTTAATTCTT
  Y
  CCTCTTGATT CTAAAACCAC CTTCTCTTCT TTAGGATTCC ACAGGAACAG AAACAACCAC
  TTCATGATAC TGTGCCCTAC AGCATACAGA AATATCTTCC ACATCTGGCA GGGTCTTTGC
  CCTCTCTCAA CAGCCCTCTG GGGCAGTTGG GATCAAAAGC ACCAAGGAGA TGAAGTCACA
  GCCCAAGGTT GTACAGCAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45296245	mCV23536566	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss147977636	ENSMUSSNP4677690	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33581741					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152790308 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dusp15	dual specificity phosphatase-like 15			Intron
				Noncoding-Transcript-Variant
Rr567515	regulatory region 567515			939 bp distal