rs33574718 SNP Detail

Summary

• ID
  rs33574718
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:143332605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AACACAGAAG TGGATGTTCA CAGTCAGCTA TTGGATGGAT CACAGGGCCC CCAATGGAGG
  AGCTAGAGAA AGTAACCAAG GAGCTAAAGG GATCTGCAAC CCTATAGGTG GAACAACAAT
  ATGAACTAAC CAGTACCCCC CGGAGCTGGT GTCTCTAGCT GCATATGTAT CAGAAGATGG
  CCTAGTCGGC CATCAGTGGA AAGAGAAGCC CATTGGTCGT GCAAACTTTA TATGCCTCAG
  TACAGGGGAA CACCAGGGCC AAGAAGTGGA AGTGGGTGGG TGGGGGAGTG AGTGGGGGAG
  Y
  ATGTGGGGGA CTTTGGGGAT AGCATTAGAA ATGTAAATGA AATAAATGCC TAATTAAAAA
  AAAAAGAAGT CTACATGTTC GTCTCTCTGT GTAATAACTA TTAATATAAC TATCCTGTCC
  TTTGTACCCA GACCTGCAAT GCCAAATTTG TCTTCCTCTA AATGGTTTCT TAAAGTCACG
  AAGCTCACAG TAGAAGTGAA TTTTATTTTT CTTGAATAAA ACAATACAGA TACATTTGGT
  TGAAGATAGG CCTGAATGAT CACATTATAT CTCTGTGTTC ACGGCTTTCT GTAATGAAGA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss45295031	mCV24510491	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs33574718					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:143332605 () rs orientation: forward

Symbol	Name	Function Class
Rr566292	regulatory region 566292	192 bp proximal