rs33570548 SNP Detail

Summary

• ID
  rs33570548
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:133594381 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCCATATA AGGCAAATGC
  CCACCTGTGG GTAATCCCAT TGACTCTGTA GTTAGTGTTG GCCCACATGC TTGCTGAGCC
  TGCAGTGTTA CAAAATATTG CTTGACAGGT GAATTCTTAT TATTTGTTCC AAATATACTC
  TTCTTAAAGT ATATTATTAA GTGTTTTTGC TTTTAATATG TGTGAAAAAT ATTAAAGCCA
  R
  AGACCGCTGC CAGATTAATC ATTTTTAAGT TTGGATACTT ATTACCTTAT CATATGATTT
  TCATATTTGG CCAAGACTGA AACCTACTTC CAAAGAGAAT CCCATTAAAG TAAAACACAC
  ATCAATTTTT AAAAGAGATT TGTTTTATTT TTATATTATT TTATTTTGTC TATTTTTACA
  CTCTTTCTAA AAATTATCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45294560	mCV27569978	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss320511740	CHEV_2_133578197	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33570548					SNP	A	G	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:133594381 () rs orientation: forward

Symbol	Name	Function Class
Gm39940	predicted gene, 39940	within coordinates
Rr565637	regulatory region 565637	1851 bp distal