rs33568775 SNP Detail

Summary

• ID
  rs33568775
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17627250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTTTTAAAT ATTAAAAATA TACTTAAAAA CACTGAATTT
  TTTTTTTAAA TTAGTTTCCC ATTGGCTGTT TGGTTTGCAG TGCTTATGGT GTTTATATAG
  Y
  CATTTATTCC TTTGTTTTGC TAATTGGATA TACCCGATTT GTCAATTCAT TTATCACTTG
  AAGGCCATTT GTATTTTTTT CAAGTTCTGA CTACTATTA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47814278	NES11716654	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	C	C	C	T	C	C		C	C	C	C		C
ss133019201	ENSMUSSNP37300	ENSEMBL	ENSEMBL_Sanger	f	SNP		C							T
ss321755895	CHEV_6_17577251	CHEVERUD	SCREENING_POP	f	SNP												C					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33568775					SNP	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47814278	NES11716654	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17627250 () rs orientation: forward

Symbol	Name	Function Class
Rr626820	regulatory region 626820	1798 bp proximal