rs33568385 SNP Detail

Summary

• ID
  rs33568385
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17595143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACAATGAA AAGCACACAT
  GTGCTCAGGT CTGAGACTCT AGAGAGAAAA TCGCAACATA AACACAATCT GAGATGCCCA
  ACTCTACATG CTGATGCTAT AGTCTTCATT GCATGCTCCC AAAACGACCT TGGATTTCAG
  ATGTGAAGAC AACAACAACA AATTCTTATC TTCACTCTGA AATTTGGAAA ATGTAAGACA
  Y
  TCTTAGCCTC AGGCACTCCT TTTAAAAAAA AGTATTTTAC ACACACACAC AAATCATTCT
  AACTTTCTTT CCTAAGTGTA CAACAAATTT TAATGATAAA ATAGCCTCTG TAGTTGGACC
  CAACAAGGAG GTCCGAGACC TAGCTCAGCC ATGTTTTAGT AGTCTTGAGC TCTTCCATGT
  ATCTAACGTT ATAAATGGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47813982	NES11717845	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33568385					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47813982	NES11717845	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17595143 () rs orientation: forward

Symbol	Name	Function Class
Gm53318	predicted gene, 53318	within coordinates
Rr626818	regulatory region 626818	542 bp proximal