rs33554369 SNP Detail

Summary

• ID
  rs33554369
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:17488366 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTGCATGC TCTTCTTTGG
  TTATTTTTGA ACCTCTTCCT CCAGCTGAAA TCCCTAACCC CTCCTTTATA TCCATTACTT
  GAAACACATG TTCATGTACT CTGACTTACT TGTAGAACAT GGACTTTCTA TGTTCTGAAT
  CCTCACTGCT CTTGTATTGT CCTGTGACCT CTCATCTCTG GCTCTACATG GACCTCTATA
  K
  GAACCTTGTG ACCAGTCTTC TGCTCCTGGA ATCTTGGAAA TACTCGTTTG GAGTATTGCA
  TCATCAGCCT TATCACTCAC TTGTGCCTGT CACCCCACCT CTCAGGCTCT ACTACTTGCC
  ACCATCCTGC CCCTGTTACG TGCCTCCCAC TGGTCTCTGC TCTGCACAAA GCCACTGTAT
  CTGTGAGGAC ACCTCAGTCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47812534	NES11721580	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33554369					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47812534	NES11721580	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17488366 () rs orientation: forward

Symbol	Name	Function Class
Met	met proto-oncogene, receptor tyrosine kinase	Intron
Rr626803	regulatory region 626803	146 bp proximal