rs33551983 SNP Detail

Summary

• ID
  rs33551983
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:150686740 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTGCGGAG GGAGGGATAG
  CCAGCGAAGC ACTTCAGCAG GTGAGCCATA GCACTTAAGA AATGGGGTGT AGACAGAACC
  AGACAGAATG CAGGCACTAA AGGCAGCCTC CGGGAGTAGG AGGGCACAGC AAAGCATTGA
  ATGTCACCAT ATTCCTTTCA GACATAAAGC TACAGGAAAG CTTTGTCCTT TTATTTAACA
  W
  ATTACTATCA GAACCATGTG CCACAGCCAA CTACAATTTT CTCATTTACA GAAAGATGCT
  ACAAGAGCTG TTTGGTCTTT GAAAAGCAGA AGAGAAACCT ATTACAGCCT GTTCTCAACA
  AAGCAGAGTG CAAACTCTAC AGAGCAGCAG CCAAACAGTC TGCTCTTGGC ACAGCAACCA
  GCCTCGTGGG CAGTGCTTCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45292628	mCV24552169	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T	T
ss147951624	ENSMUSSNP6005862	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33551983					SNP	A	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:150686740 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Abhd12	abhydrolase domain containing 12			Intron
				Noncoding-Transcript-Variant
Rr567118	regulatory region 567118			1 bp proximal