rs33549864 SNP Detail

Summary

• ID
  rs33549864
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:128080635 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGCA ACAAAGTTCA GTTGCCTTGC
  W
  TAGAAATCTA ATGGTCTAAG ATCAT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45291670	mCV22518062	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A
ss147555466	ENSMUSSNP5279765	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		A
ss320501948	CHEV_2_128064451	CHEVERUD	SCREENING_POP	f	SNP					T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33549864					SNP	T	T	T	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:128080635 () rs orientation: forward

Symbol	Name	Function Class
Gm75220	predicted gene, 75220	976 bp upstream
Rr373833	regulatory region 373833	1156 bp upstream
Rr564683	regulatory region 564683	1389 bp proximal
Rr564684	regulatory region 564684	1960 bp proximal