rs33547527 SNP Detail

Summary

• ID
  rs33547527
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124923543 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTATA CCCATAGCTG GCAATGCTTT
  R
  CCTCACAGGG GAGCCTTATT CCAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46289601	mCV23951537	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G	G
ss145843980	ENSMUSSNP4844515	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33547527					SNP	G	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124923543 () rs orientation: forward

Symbol	Name	Function Class
Gm42054	predicted gene, 42054	within coordinates
Rr672636	regulatory region 672636	205 bp distal
Rr672637	regulatory region 672637	57 bp proximal
Tssr80021	transcription start site region 80021	301 bp upstream
Tssr80022	transcription start site region 80022	335 bp upstream