rs33535057 SNP Detail

Summary

• ID
  rs33535057
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:133532341 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTAGCCTG AGTTCTTGCT
  GCGTGAGACA GTGCACACCT GCAGTCCCAG TACTGGAAGG CTAAGGTAAG ATCGGACAGC
  CTGGGTTATA GAGGTAGAGC ACCTCAAAAG CAAATAAAAA CAGAGTCATT TCTTAGAATC
  TACCTTCCAC CTATCTAGCT TTGGTCAGTA GGGTTTGGGA AAGAGATACC TGAACTCCAT
  M
  ACTAATAAAC GCACGTGAGC ACTGACTATT CTAACAAAAG ATAACCTAAC CTCAGTAAAG
  TATCTCTTAA TGAGACCATG GGTCCTCTTG TTCCCTGGGC TTTCTGAGTT TATGTGAAGC
  ACTACGGTGG TCATTGGAAG CAGAGAGGAC ATGACTCATG CACTCAGGGA GCATGCAGTC
  TAACAAAGAG GCAACGATAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49497540	NES12877395	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	A	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33535057					SNP	C	C	C	C	C	C	C	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49497540	NES12877395	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:133532341 () rs orientation: forward

Symbol	Name	Function Class
Snrpe	small nuclear ribonucleoprotein E	Intron