rs33534321 SNP Detail

Summary

• ID
  rs33534321
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:75847769 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAGAAAGTC GTGTTTGATG AAACTCTGGT GTTTCTCATG
  ATATTAATAA AATTTAAAAA GCAAAAAGAT TTCCATTTGC GATATGCAGA GTTAATCAAG
  R
  CTAAGTATGC TTCTTTCTCA CTAGACTTCT CCGAGCCTTC GATACTTTAA TGTTTATGGG
  AGTTTCCTTA GTTACTGGGC CTTCGAGCTA TTTTTTTCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45290610	mCV23799681	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss146769912	ENSMUSSNP3621680	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss320352413	CHEV_2_75855482	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33534321					SNP	A	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:75847769 () rs orientation: forward

Symbol	Name	Function Class
Gm75271	predicted gene, 75271	within coordinates
Pde11a	phosphodiesterase 11A	Intron
Rr559634	regulatory region 559634	13 bp distal