rs33533128 SNP Detail

Summary

• ID
  rs33533128
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19373340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTCCCCAC GACAAATAGT
  TTAATTAAAA ACTAGGCAAA GGGATGGATG TGGTAGGGCA CACCTGTGAT CCTAGCATTG
  GGGAAGCAGA GGCAGCAGAA TTGTGAGGGT GAGCCAGCCT GGGGCATATA GCAAGAATTC
  CCAAAGAAAC AAGCAAGTCA GCGAACAATT ACAACAGAAA GAAGGACTAA GCAAACATTT
  Y
  AGGAGGGTAT CACTGAGAAC ATAGGAAGGC GCTGAATGCA GCTTGCAGTT AGGCTGATGC
  AAATGCCAAC CACAGCCCAC AGCGAGGTGT CACTTCCTCT ACAGTAGGGT GGCTATCAGA
  TATTTTAAAG TCTAATTATC TATACAACAG GAAATAACAG ATGTTGATAA GGATGTGAAA
  GTACCAGAAA CCTTTGACCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	MOLF/EiJ	PWD/PhJ
ss46824898	NES10847918	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	MOLF/EiJ	PWD/PhJ
rs33533128					SNP	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46824898	NES10847918	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19373340 () rs orientation: forward

Symbol	Name	Function Class
Rr573974	regulatory region 573974	within coordinates