rs33532260 SNP Detail

Summary

• ID
  rs33532260
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19372335 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAGGCCAC TGAAGGCCCT
  TGTTGGCCTG TTGGAGGACT TGTGTTTTCT TCTGAACTAT AATGGAAAGC CAGTGCAATA
  TTTACATCTG TGCTTTGCAA CAAACTGGCA TTCATATCTA ATTTATATAT GTTTTAAAAT
  GTCTCTGGCT ATAGCTTTAT AGACAGTGGT TTCAAAATGG AAATCTGAAG CAAGGAAATC
  W
  TCCTAATAGT TTTAAATATC CTGAAGGAGA GATGAGAGAT GAGAGATGAT GGTGCCTTCA
  AGTTTTTCAG GCTGCATTAT GCAAATTTAT ATAGTGTATA TGCACAGATA AAGATCCAAC
  AGTCCAAACG CCATCCTCCT TTCAAGTTTA AATCATAACA GTCACAGAGT TCTTTAATGT
  CCAGAGTTAT TCAAGTTAGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	MOLF/EiJ	PWD/PhJ
ss46824889	NES10848028	PERLEGEN	MM_PANEL2	f	SNP	T	T	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	MOLF/EiJ	PWD/PhJ
rs33532260					SNP	T	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46824889	NES10848028	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19372335 () rs orientation: forward

Symbol	Name	Function Class
Gm66414	predicted gene, 66414	1361 bp downstream
Rr573974	regulatory region 573974	791 bp proximal