rs33531512 SNP Detail

Summary

• ID
  rs33531512
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19371612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTCCATG GATATTTACC
  AAATAGCCAC AAGTGTTTGG ATATTCTCCT AGGTATCTAA AATAAGCCAG AGAGTGGTCC
  CTGCCTGAAT GACATCACAT AGTAATGGGG GCATGTGTAA GTAAGTAAGT GTGGGATTGT
  ATAACTTGAC ATGGTGTTAC TAGGGGCTTT ATTTACTCGG CTTTTTGTCA CTAGCACATG
  M
  CTATGATAGA GAAGCTTACG AGGAGAACAA TGGAAAGATC TGTGTGGATT ACAGTTTTGC
  TGTTTTCATT CCATGGTTGT TTAGACTATT GTTGCGCCAG TGGCAAAGGA GCTTCATATC
  CTATGATATG AAGCTGCTCT CCCGATTTGG GTTAAAAACT TGCAAAGGAC ACAGACCAAC
  CTCCTAGGGC ATGTTTCAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	MOLF/EiJ	PWD/PhJ
ss46824880	NES10848070	PERLEGEN	MM_PANEL2	f	SNP	A	A	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	MOLF/EiJ	PWD/PhJ
rs33531512					SNP	A	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46824880	NES10848070	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19371612 () rs orientation: forward

Symbol	Name	Function Class
Gm66414	predicted gene, 66414	638 bp downstream
Rr573972	regulatory region 573972	1663 bp distal
Rr573973	regulatory region 573973	1754 bp distal
Rr573974	regulatory region 573974	1514 bp proximal