rs33523218 SNP Detail

Summary

• ID
  rs33523218
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:155597876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTT CTGGTCTCCT GGGACACTGG
  Y
  GACACACACA CAGACACACA CTAAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45288947	mCV23301432	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss148058435	ENSMUSSNP4610510	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss320575290	CHEV_2_155581692	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33523218					SNP	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:155597876 () rs orientation: forward

Symbol	Name	Function Class
Procr	protein C receptor, endothelial	485 bp downstream
Rr568116	regulatory region 568116	within coordinates
Rr568117	regulatory region 568117	12 bp distal
Rr568118	regulatory region 568118	1004 bp proximal
Tssr21121	transcription start site region 21121	999 bp downstream
Tssr21122	transcription start site region 21122	962 bp downstream
Tssr21123	transcription start site region 21123	942 bp downstream
Tssr21124	transcription start site region 21124	888 bp downstream