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rs33521843 SNP Detail
Summary
  • ID
    rs33521843
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr2:143825030 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          ACACTGCCAC AGACAAGCAG TAAAACCCAT GGCATGGCCC
    CAATCAGCCT CTGAAAGAGC TCCAGCTGGC CTACAGAAAC GTGCCCAGGC CTGCCTCCAT
    R
    CCTCCCACAT CTCCTCTGTG GTACCTGTCA TCAAAGCCTT GCACCAGCCA GGGACAGAGT
    GAGCCTGGTG ACGTGACCCC AGTTGTATCC TGGGCTGCT                       
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
ss45289197 mCV22374151 ABI CRAMUS_MOUSE f SNP G G A G
ss147777064 ENSMUSSNP4444842 ENSEMBL ENSEMBL_Sanger f SNP G G G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
rs33521843 SNP G G A G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr2:143825030 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr373991 regulatory region 373991 within coordinates
Rr566349 regulatory region 566349 1607 bp distal
Rr566351 regulatory region 566351 615 bp distal
Rr566352 regulatory region 566352 within coordinates
Rr566353 regulatory region 566353 500 bp proximal
Rrbp1 ribosome binding protein 1 Intron
Noncoding-Transcript-Variant
Tssr26572 transcription start site region 26572 54 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory