rs33518113 SNP Detail

Summary

• ID
  rs33518113
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:16551273 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACAGTCTA ACTTTATGTG
  TGTTTGAGAG TCACTGAAAC GAATACACAG CTAAGAGCAC AGTACGCGGG TGTCCACCCA
  GCACTCAGAC CACAGTTAGG AAGCATAGCT TCGGCATAGG CTGCTAACCT TTGGAAAATA
  AGCAAATTTC GCGTCTGCTA GCATTTGGAG TGGGTCCATA ATGGCATGCA TCCATACCCA
  R
  AGGTTGTTGA CTTGAACTCT TCTCAACCTG ATATATCTGT AAAAAGGGAA AGCCGAGAGA
  AATACACACA AAAGTGCCCT TTAGGCTCCT GTGACCCTGG CAATATATTC CTCTCTATGA
  TTGCAAATAT TTAATCATTT GCTCTGTACA CACAGCAGTC ACAAAATGTT TTTCAGTGTA
  TTTCTGGGAA ATGTGGAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	DBA/2J	NOD/ShiLtJ	WSB/EiJ
ss47807714	NES11714156	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	DBA/2J	NOD/ShiLtJ	WSB/EiJ
rs33518113					SNP	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47807714	NES11714156	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:16551273 () rs orientation: forward

Symbol	Name	Function Class
Gm36503	predicted gene, 36503	within coordinates
Gm67370	predicted gene, 67370	within coordinates
Rr626711	regulatory region 626711	877 bp distal
Rr626712	regulatory region 626712	496 bp distal
Rr626713	regulatory region 626713	1104 bp proximal