rs33490306 SNP Detail

Summary

• ID
  rs33490306
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:143744389 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCTTGTTTC CCAACACGAG ATGGGAAAGG GATGGGAGGG
  CAACTGGGAG GAACTGGGAG AAGCACAGAG AGGGGAAACC ATAATAGGAT ATATTATATG
  R
  GGGAGGAGAT CTATTTCTGT TTTATATTTT CTTTCATTCA TTTATTTATT TAAGATTTAC
  TTTATGTAGG TGAGTACACT GTAGCTGTCT TCAGAAACA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45284382	mCV24514971	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	G
ss147774436	ENSMUSSNP6284948	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		G
ss320535016	CHEV_2_143728205	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33490306					SNP	G	G	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:143744389 () rs orientation: forward

Symbol	Name	Function Class
Rr566331	regulatory region 566331	1097 bp distal
Rr566332	regulatory region 566332	988 bp proximal