rs33477293 SNP Detail

Summary

• ID
  rs33477293
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:75927002 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTTATCTCA CACAGTTGCG AGGGTCACAA TCACAGCCAT
  GTTTCCTGAG TTGAGTTCAC TTCAAAAGCA GAGATATGGG CAGGTCAAAG ATCAAAATGT
  M
  TAGCCCCTCC CCAAAGTCTG TGAAGCACAG GCAGACTTAA AAATGCTGTG ATGTTTATTG
  ATTCTCTTCC CAGTCACATC AGTTTGCTCC TTTATTACT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45282884	mCV23800022	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	A
ss146770211	ENSMUSSNP756712	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss320352646	CHEV_2_75934715	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33477293					SNP	A	A	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:75927002 () rs orientation: forward

Symbol	Name	Function Class
Pde11a	phosphodiesterase 11A	Intron
Rr559647	regulatory region 559647	819 bp proximal
Rr559648	regulatory region 559648	1203 bp proximal