rs33476932 SNP Detail

Summary

• ID
  rs33476932
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:17854298 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGAAATAT TTATCTTACA
  TAATTTAAAT TTCTTCTTAA ATAAATTCAT ATCTATCTCA GGAAATTAAA AACAGTAGCA
  TAATTTTTAA TAGTCATTAC AAATATGAAG ACAGGTTCTA ATAAATAAAA TGTGTAATAC
  AAATAAAAAC TTTTTTTTCT CATTTAAAAA ACACCCACTC ACTGAAAGGT GGGCAGTGAG
  M
  AGGATGTGAA GTGAATAAGT AAATGATAAT AATAATAATA ATAATAATAA TAATAATAAT
  AATAATAAAA CAAAGAATCA CTCTACTAGA AAAAAGAGAG AAAGAAAAAG AGAGAAAGAA
  AAAGACAGGA GAGAGAGAGA CAGAGAGAGA AAGAAAGGAA AGAAAGATTT TAAAATTGTT
  TCTTCGATGT GTGATAGATT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46817814	NES10864635	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33476932					SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46817814	NES10864635	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:17854298 () rs orientation: forward

Symbol	Name	Function Class
Mir124-2hg	Mir124-2 host gene (non-protein coding)	63 bp downstream
Rr573852	regulatory region 573852	555 bp distal
Rr573853	regulatory region 573853	1687 bp distal
Rr573854	regulatory region 573854	1525 bp distal
Rr573855	regulatory region 573855	1340 bp proximal