rs33464204 SNP Detail

Summary

• ID
  rs33464204
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:17645842 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTTAAAAC AAAGATATTA
  TTCTTAATTT ATTCATTGCT TTTTCAAAAT AGAAAAAAAG GAAAAAAAAG AATGAAACAA
  AAGATAAAAC TTTAAATGGA AGAAAGAGTG ATAAATTATT TTAAATAAGA AAATTTTTAT
  TGTTATTTTT TTTCTCCTTG AACCATAAGC TTGAGGTCAT CTAAGGTGTC CTGAGGTTAC
  M
  AGTGTACAAA ATTTCATCTA AGCCAATTAG AACACCTAAC CCGATTAGCT TAAAGAGGAT
  GGACAGTAAC AACCTCATTA CCTAGTTCTG CAAAAACATT TGCAGAATGA GTTTATTAAT
  TTTATTAAGT AAGCTAGAAA GTAATATGTA TCAAAATTAT TTTTGAAGTA TGAATGAGAA
  GTGTTACTTG GTTTTTCTGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	NZW/LacJ	PWD/PhJ
ss46816410	NES10862596	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	NZW/LacJ	PWD/PhJ
rs33464204					SNP	A	A	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46816410	NES10862596	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:17645842 () rs orientation: forward

Symbol	Name	Function Class
Rr573832	regulatory region 573832	1337 bp distal
Rr573833	regulatory region 573833	779 bp proximal