rs33462148 SNP Detail

Summary

• ID
  rs33462148
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:102372309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAATGCTTG GAGGATTTGA
  TCACAGAGTC TTCCTGTAAA CCTGGGGTAG AGAGAGCTCA ATATATAACT TAGGATGTTC
  TGGTGGCAAA GAACAGGAGA AAGAACTTTC TGTGGACTGT TGGGGGAGGT GAGCCTTCAG
  CGTAGACTTG GAGACAACGT TGAGGCTGTT TACTTCAGCC CATGTGCACT GTGCCTTGAC
  R
  TTGCTCATCA ATCTCTATTT CTCTATTGTA CACACACTCT ACTGTCACAC AAGCCCCCAC
  AAACCCCTAA ACTAAAGACC TCTTCCCCCC AGGCCCCCAC CACATGAACT GCCATTGATA
  GCCCTTCTCC ATATCAGGTA CTCTCAGCTA CCTGGTCAGA CAAACTAGGA CTACAGGAGC
  ATCCATGAGC CCTGTTTCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46816826	NES10725592	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33462148					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46816826	NES10725592	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:102372309 () rs orientation: forward

Symbol	Name	Function Class
Rr582235	regulatory region 582235	1678 bp proximal