rs33455592 SNP Detail

Summary

• ID
  rs33455592
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151866174 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGCTTTTC AACACCTGAT
  AGTACTGGCT CACTCGTGTT TCTAATGTTA CCTGGTCAGG GAGGGGGTGC TTGCTTTATT
  CCTGGTGGAC AGCTACCTCT GTCTGCCCCG TGTCTGCCAT TCTGTCATCA CAGGGGATCT
  TGGTGGATGC TAGTCTCTGG CCAGCCTTGA GTCTTTGGCT CTTTGCTTGG AGATCAGTAT
  Y
  GCTGGAGATC TCAGCCGCAC AGCACAGAGA TGGTGGAGCC CTTTATGTCC AAAGACTCTA
  AAGGAGAACC TCACCAGCTT TGGGCGGCTC TTGGCATGCC CTGGCTTGAA ACCACATCTC
  CACTTCTTGC ATCATCTGCC TTTGTGGTAA CACTGCCCCC TCTTGGTGTT TGCCTCTCTT
  TTACCTGGGC ACTTGTGATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45281210	mCV23078901	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss147960929	ENSMUSSNP2062366	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
ss320561845	CHEV_2_151849990	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33455592					SNP	T	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151866174 () rs orientation: forward

Symbol	Name	Function Class
Gm75398	predicted gene, 75398	within coordinates
Gm75402	predicted gene, 75402	within coordinates
Rr374074	regulatory region 374074	within coordinates
Rr567262	regulatory region 567262	1841 bp distal
Rr567263	regulatory region 567263	150 bp proximal
Rr567264	regulatory region 567264	347 bp proximal