rs33441823 SNP Detail

Summary

• ID
  rs33441823
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101261508 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGTTGGGA GAGATTTAAC
  AGTGATTGAA AAATAGCTAA GCTTGCCAGC TGAGCCACTG TTATAATCAG ACACATTTTG
  CCCATTCTGA CTCCCTTGAC CATCTGTGAC CAAACCACGT TGAAAGCACC TGATCTTGTC
  TGATTTTACT CTGACTTTTT TTTTTATTAA TATAAAATTT TATTGGCATA CACAGTGATA
  S
  TTTCAAAAGG ATGTCATCAC ACACGTACGT TAATTCTCAC TTTTCATCAC CACATGACTA
  TCTTTAGACT TTGCTGTTAG GTCAAGTAGA AACCCAGGGC TATATATCAC ATGAATTTTT
  GAGGCTGCAT CATCTTCCAG GTTCCTGCTG TGTATTTCTA GGTGTCTCCT TGCTTCTGCC
  TCCCCTTCTG CTTCCTCCTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46813901	NES10711787	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33441823					SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46813901	NES10711787	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101261508 () rs orientation: forward

Symbol	Name	Function Class
Gm32900	predicted gene, 32900	within coordinates
Rr582017	regulatory region 582017	26 bp proximal
Rr582018	regulatory region 582018	264 bp proximal
Rr582019	regulatory region 582019	1362 bp proximal