rs33437618 SNP Detail

Summary

• ID
  rs33437618
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101262517 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAACCTCCT GGGGATCCTG
  GCCATACCAC TGGCTGATGC CTGAAATTTA GAATTGTCAG GAATGACTTA TATGATGGAC
  CGGGTCACAG ACCCACACAT TAAAAACTTG GCGGACTGAA GGTTAATAGT CTTCTATAAC
  ACCAGTGCAG ACACAATGTT TTTATTAGTT TTACCTACAA AGCCCTGCTC ACTTTTAACA
  Y
  ATACACACTT CAAACAAAGT ATATAACCTG GGCATAGGCT GTTTGCTCCA TTCCCCTGAC
  TCTTCCTCCC AAACTTGGGG CTCCTAGAAT CTTAGCAGCA GCAACAACAA AGAAAAAAAA
  ATGGAGCCAA GCATGTTGGC AAACACCTTT AATCCCAGAT CTCTGGAGGC AAAAGCAATC
  AGAACTCTGA GTTCAAGATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46813937	NES10711751	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs33437618					SNP	T	T	T	T	T	C	T	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46813937	NES10711751	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101262517 () rs orientation: forward

Symbol	Name	Function Class
Gm32900	predicted gene, 32900	598 bp upstream
Rr582017	regulatory region 582017	746 bp distal
Rr582018	regulatory region 582018	108 bp distal
Rr582019	regulatory region 582019	353 bp proximal
Rr582020	regulatory region 582020	1483 bp proximal