rs33429108 SNP Detail

Summary

• ID
  rs33429108
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:13664275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCAGGGAT ATACCTCAAC
  TCCAAAAACA GTAAAAATAT AAGGTGGATG GTAGCTGAGG AATGACACCT AAAACTGTCC
  TGTGTTCCAC ACATGCACAT AAACAGACAC ACACACACAG GTTACTATCC AGTTATTACT
  TTTTAGATTT TAAGTCATTC ATCATCACAT TTAAGACGAA ATTTCAAAGG TCACTGTGAA
  R
  ACTGATAATG ACTGAAGAAT TATTTGGCCA AATGAAGTTC ATTTGCCTAG CAGGGTAAAG
  AATTAAAATT ATCTGAGTAC CTTGGTTCAT CATCTTTAAA CAAGGAAATT GAATCCTATC
  ACACAATATA TAAATCTAGG TATTTATGTA GTAATAAAAT ATACATGTAT AAGAAATAGC
  CATCTGTGCA GTTAATTATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss47797638	NES11720747	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G	A	G	G	G		G	G	G		G
ss321748464	CHEV_6_13614276	CHEVERUD	SCREENING_POP	f	SNP										G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs33429108					SNP	G	G	G	A	G	A	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47797638	NES11720747	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13664275 () rs orientation: forward

Symbol	Name	Function Class
Rr626579	regulatory region 626579	1366 bp proximal
Samtor	S-adenosylmethionine sensor upstream of mTORC1	Intron