rs33424257 SNP Detail

Summary

• ID
  rs33424257
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151866237 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGTGCTTG CTTTATTCCT
  GGTGGACAGC TACCTCTGTC TGCCCCGTGT CTGCCATTCT GTCATCACAG GGGATCTTGG
  TGGATGCTAG TCTCTGGCCA GCCTTGAGTC TTTGGCTCTT TGCTTGGAGA TCAGTATCGC
  TGGAGATCTC AGCCGCACAG CACAGAGATG GTGGAGCCCT TTATGTCCAA AGACTCTAAA
  R
  GAGAACCTCA CCAGCTTTGG GCGGCTCTTG GCATGCCCTG GCTTGAAACC ACATCTCCAC
  TTCTTGCATC ATCTGCCTTT GTGGTAACAC TGCCCCCTCT TGGTGTTTGC CTCTCTTTTA
  CCTGGGCACT TGTGATGGTA ATAAAGGCCC CCTTAGACAG TCCTTATGTT CTGATTCCTA
  ATTTAATTAC ATCTGCAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45277189	mCV23078889	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss147960938	ENSMUSSNP359624	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss320561847	CHEV_2_151850053	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33424257					SNP	A	G	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151866237 () rs orientation: forward

Symbol	Name	Function Class
Gm75398	predicted gene, 75398	9 bp upstream
Gm75402	predicted gene, 75402	within coordinates
Rr374074	regulatory region 374074	within coordinates
Rr567262	regulatory region 567262	1904 bp distal
Rr567263	regulatory region 567263	87 bp proximal
Rr567264	regulatory region 567264	284 bp proximal