rs33422670 SNP Detail

Summary

• ID
  rs33422670
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101050672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGTGGACA GCACCAGTCC
  CTCTGATTAC AGAGAACATT TGGATCATAT ACCTTCATCC TGCATAAGGA GCCCTGGCCT
  TGTGAGCTCA GGCCACCTAT TGCCACATTC AGTGTGGCCT CTGCAGGGTA GATGCTCCAC
  CTGAGACTGG TGTGTCTGCC ATTTCTAGCA TATTGGCGGT GGTGCTGTGA GTATTATTCC
  R
  TTCATGCCTT TGTTCCTTCC CAGTCCTTCA GCAATGAGCA GTACCTAGTG AGATCCTTCC
  AGCTCCTGTT CTAACCTCCC AGGTAAGCTT GCCTGTAGGC CAAAGGTTAT CAAAGTCACA
  GGTTGAATGG CCCTCCCCAG TCCGTAAAGA ATCCATAAAG ATGAATAAAA AGAGGAGCAA
  AGGATTTGCT TTCATTGCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46811639	NES10722057	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	A	A	A	A	A	A		A	A	A	A		G
ss320851093	CHEV_3_100947279	CHEVERUD	SCREENING_POP	f	SNP											G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33422670					SNP	A	A	G	A	A	A	A	A	A	A	G	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46811639	NES10722057	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101050672 () rs orientation: forward

Symbol	Name	Function Class
Rr581968	regulatory region 581968	1290 bp distal
Rr581969	regulatory region 581969	1534 bp proximal