rs33422203 SNP Detail

Summary

• ID
  rs33422203
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101076186 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTAGGGA GGAGTTGGAT
  ACTTGGGTTG GAGAGTAAGG GAGGTCTTGA GTGACAGCAG CTCAGAGTCA GTCCCTGCAG
  GGAAAGGGGA CACGGTGAGG AGAGTAACAG GAGAGGACAC TGGACAGTCA CAGCTGCACA
  GGTGGGGGGC CAGCATGCAG GTTAGTCTGT AAGCCCCATG TCCTCATGTG GAGACTGGAG
  S
  TGGTACACTG ACCTCATAGG ATCTCATACT ACAGAAAGAA CTCAGAATGC CTGGTACAAG
  CTAGGACATA GTAGTAGATG AAAGGTGCCT CTCATTCCAG GAGCTGAGGT CACTGCATAG
  CAGAGGAGAG GAAAATGTAG CTGGAACACC GGGGAACTTG AGACAGTGAC CTCTTGAGAC
  AGATAAGCAA AAAGCCAACA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46811981	NES10720923	PERLEGEN	MM_PANEL2	f	SNP	C	G	C	G	C	G	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33422203					SNP	C	G	C	G	C	G	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46811981	NES10720923	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101076186 () rs orientation: forward

Symbol	Name	Function Class
Rr375458	regulatory region 375458	158 bp downstream
Rr581973	regulatory region 581973	1236 bp proximal