rs33421867 SNP Detail

Summary

• ID
  rs33421867
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101078656 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCATAAAT CCCAATTCAG
  CAACATAAAG AAAAGTGAAA AAGCCAAGAG ACCGCTGCAG CAATGTCATC CACGGAGAAC
  GAGGGAGACA GATTCCTGGG CAGAAAAGCC GGAAGAATGC TCGTAGCGTG TCCTAAGAAA
  TGAAAGAAGA AAACGAGATC GTGATTGAGA GTTCAAACAA CCGAATAAAA TAGGAAGACG
  R
  TGTAACATAT GTAAGAAGAA TTCAGCAAAG AGGAAGGAAT CCTGGAGAAA TGCCGGAGAT
  GAGAAACATA AATAAGATCT GTGAGAAGTC TCTTCAGTAG AAAGGGGTGA GGAGATGAGA
  GTGTCTGAGC CCGAGGCCGA GGTGGGAGAC TGCAGCAAGC AAACAGACGC AGACAAAATT
  ACACGGAGGG TGCCGTGTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46812026	NES10720775	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs33421867					SNP	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46812026	NES10720775	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101078656 () rs orientation: forward

Symbol	Name	Function Class
Rr581973	regulatory region 581973	804 bp distal