rs33420261 SNP Detail

Summary

• ID
  rs33420261
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:86487561 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTGTACACC ATAGAAAAAC AGAAATAAAC ACACAATAGA
  CCCTACATTT TTTTTTCACT GAAATGTTGA TAAACTACAC AAACAATTCA AAGTCTCTTT
  K
  GCTTTCCCAG GCCTCATAGA ACTCAAAGAC ACACATTTGC GATCACTTGG CCCTCAATGT
  GATACTACTT TCTACAGAGT GTACTCAAGT CCTGCTATT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45276172	mCV23002433	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T	G
ss146862861	ENSMUSSNP2230312	ENSEMBL	ENSEMBL_Sanger	f	SNP			G		G
ss320378753	CHEV_2_86497374	CHEVERUD	SCREENING_POP	f	SNP						G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33420261					SNP	T	T	G	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:86487561 () rs orientation: forward

Symbol	Name	Function Class
Or8k38	olfactory receptor family 8 subfamily K member 38	mRNA-UTR