rs33403929 SNP Detail

Summary

• ID
  rs33403929
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:100905996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGACAATTTT TCAGAACACA ACATTTAGGT AAGGCGTTTG
  TCTGGCATGC ATGCACAAAA ATCTGGGTCT GAACCCTCGT GTTGTCTATG TGTGCTGTGT
  R
  TATATGTGTA TATATGTATG CTGTGATAGG GCAGATGTGT AATCCTAGCA CTGAGGAGGT
  AGAGGCAGAA AGATCACAAG TTCACGATTA TCCTACATAG                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	NZW/LacJ
ss46809776	NES10728126	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	NZW/LacJ
rs33403929					SNP	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46809776	NES10728126	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100905996 () rs orientation: forward

Symbol	Name	Function Class
Cd101	CD101 antigen	Intron
Rr581939	regulatory region 581939	within coordinates
Rr581940	regulatory region 581940	511 bp proximal