rs33398242 SNP Detail

Summary

• ID
  rs33398242
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:53459043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACATA CATATATGTG TATATATATA
  Y
  ATTAGATTTT ATTTATTTTA TATAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46271427	mCV24471795	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss144884320	ENSMUSSNP1459247	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33398242					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:53459043 () rs orientation: forward

Symbol	Name	Function Class
D8Mit230	DNA segment, Chr 8, Massachusetts Institute of Technology 230	290 bp distal
Gm23666	predicted gene, 23666	400 bp upstream