rs33397851 SNP Detail

Summary

• ID
  rs33397851
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127671787 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGAATAATT CCTAGATGAC AAAGATATAT TTGATTCTAC
  ATTATGTTAT CTATGTACTA GAGAATGGAA ATCTTGACTT CAACAACCCA AATATCACAT
  R
  AAAGAGCAAT CATTCAGAAG TGTTCAAAAA GTCAGAAACA GTATTTGCTT CATAGTCTAT
  CTAGATTAGT TGATCTCCAA CGTCATTGTC TTATTTCTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45273552	mCV22597073	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss147542336	ENSMUSSNP6830890	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs33397851					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127671787 () rs orientation: forward

Symbol	Name	Function Class
Bub1	BUB1, mitotic checkpoint serine/threonine kinase	Intron
Cpgi12232	CpG island 12232	1563 bp proximal
Rr397289	regulatory region 397289	1908 bp upstream
Rr564601	regulatory region 564601	1317 bp proximal
Rr564602	regulatory region 564602	1982 bp proximal
Tssr26147	transcription start site region 26147	1950 bp downstream