rs33392547 SNP Detail

Summary

• ID
  rs33392547
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100730624 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGTGTTCT GAATGCTGTA
  ACAAGGAAGA TGGGTCAGGC GGCAGATGCA GATGAAGTTG TGGAGTCTCT AGGGGAGAGC
  CCAGTGGAGA GATGACGACT CAGCAGCTGG CTGTAAGGAG CCAGAGCTCA AAGGACCTGA
  GCTGAGGACA CAGGTGCTCA GGAGTCCAGA TACAGGGCAG CTGAAGCGGA GCAGAGCAGC
  R
  GCTGAGGGCA CTCTAGGGAC ATGGTGCTGT GGGAAGAGTG GCCAGAGGAC ACAATCACAG
  GGAAGCCCAT GGCTGAGGGG AGAGTGAGGA TGACTGGGCA GGGTGGGGGG CATTAGCAGA
  GTCACAGAGA ACAGTGGGTG TCCCTCAAGG GCTGGAGAGG GAGCAAAGCT TCTGTCTGTC
  TATCTGTCTG TCTGTCTGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	LG/J	SM/J
ss46807721	NES10720190	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A
ss320849654	CHEV_3_100627231	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	LG/J	SM/J
rs33392547					SNP	A	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46807721	NES10720190	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100730624 () rs orientation: forward

Symbol	Name	Function Class
Gm32720	predicted gene, 32720	within coordinates
Rr581912	regulatory region 581912	1642 bp distal
Rr581913	regulatory region 581913	1767 bp distal
Rr581914	regulatory region 581914	1631 bp distal