rs33391651 SNP Detail

Summary

• ID
  rs33391651
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100728740 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACAAAGGA GGTTAGAATG
  CTGTTCCTAT TTTTACGGTG TGATTAGTAA AGGCCACAGA CAAGTCAACA GTCGCAAGCA
  GAGTCTCCAG GGTCACATGG GAGCAGGTAA ACCACAAATC TGCATAAAAC AAAGAAAAGG
  GGGGGATGGA TTCTAGGTGG AGAGACCAAC AAATAACCAG GCTGCTTGTC CTGAGAAAGC
  R
  TGTCACTTTA GAGAAAGCAG TGGAAAATGC CTGGTCCACA CAGTGCAGGG AGAGAGACAG
  CATGCATTTT AGAATTCTGC ATTGCAGAAG TGTGTCAAAT GCCCCCTAGA GGCTGCCTGT
  GGGAACAATG ACACATGTAA ACTAAATCTT GTTTAATTTA TTTATTTTAT TATATGTGTG
  TATGTGTACC TGGGTGTATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss46807715	NES10720357	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs33391651					SNP	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46807715	NES10720357	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100728740 () rs orientation: forward

Symbol	Name	Function Class
Gm32720	predicted gene, 32720	within coordinates
Rr581910	regulatory region 581910	1237 bp distal
Rr581911	regulatory region 581911	1636 bp distal
Rr581912	regulatory region 581912	within coordinates
Rr581913	regulatory region 581913	96 bp proximal
Rr581914	regulatory region 581914	232 bp proximal