rs33387132 SNP Detail

Summary

• ID
  rs33387132
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:93095863 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCCAACAT GGAACTATGT
  GAAAAAGACT GTGCACTCTG TGTGTGTGTG TGTGTGTGTG CATGCGCGCA CATGCACTTA
  TATAAGCCTG GCTCAATTCC CAAGCAGGGA CAAAGGAGAG AGAGAGAGTG AGCAGTTCCT
  ACTTAACGTC TCTTCTGCTG ATTTTATTAT TACCTATAAT GTTCTAATTA AAAGTCAAGC
  R
  CTCTCAATAA TCCCCAATGA GACCCAAGAA AATGTCTTGG TCCTGATTTT AGCTCCATGA
  GAAATAGTCC AGTATAGTAC CAGCCAATAT TATCTGACCT TCTAAAAGGT TACCTGCTGT
  CTCCCACACT TCAACATCCC TGTGTATGCC CTAGTGGGCA GAGACAGACC TCTCTGGCTT
  TAGTTTCTGT AGCTCCACAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45271838	mCV23855714	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss146940946	ENSMUSSNP6928186	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss320395270	CHEV_2_93105675	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33387132					SNP	G	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:93095863 () rs orientation: forward

Symbol	Name	Function Class
Rr561140	regulatory region 561140	1065 bp proximal
Tspan18	tetraspanin 18	Intron